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- Magnus Alm Rosenblad
Magnus Alm Rosenblad
Forskare
Institutionen för kemi ochOm Magnus Alm Rosenblad
Bioinformatiker, arbetar inom CeMEB (Centre for Marine Evolutionary Biology) och NBIS (nbis.se), som är en del av SciLifeLab, med bioinformatisk support till svenska forskare.
Huvudsakligt område är assemblering och annotering av en mängd marina genom, samt identifiering av icke-kodande RNA (ncRNA).
Gammal WWW: http://bio.lundberg.gu.se/~magalm/
Kurser
BIO403 Advanced Bioinformatics, 15 hp, och BIO442 Evolutionary genomics, 15hp, (inom MSc--programmmet Genomics and Systems Biology)
BIO210 Bioinformatics and Functional Genomics, 15.0 hp
BIO003 DNA som en tidsspegel (bildningskurs, på svenska)
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Evidence for further non-coding RNA genes in the fungal rDNA
region
Magnus Alm Rosenblad, Ellen Larsson, A. Walker, N. Thongklang, C. Wurzbacher, R. Henrik Nilsson
MycoKeys - 2022 -
Genomic Characterization of the Barnacle Balanus improvisus Reveals Extreme Nucleotide Diversity in Coding
Regions
Magnus Alm Rosenblad, Anna Abramova, Ulrika Lind, P. Ólason, S. Giacomello, B. Nystedt, Anders Blomberg
Marine Biotechnology - 2021 -
The enigmatic RNase MRP of
kinetoplastids
Magnus Alm Rosenblad, Marcela Dávila López, Tore Samuelsson
Rna Biology - 2021 -
From tides to nucleotides: Genomic signatures of adaptation to environmental heterogeneity in
barnacles
J. C. B. Nunez, S. P. Rong, D. A. Ferranti, A. Damian-Serrano, K. B. Neil, H. Glenner, R. G. Elyanow, B. R. P. Brown, Magnus Alm Rosenblad, Anders Blomberg, Kerstin Johannesson, D. M. Rand
Molecular Ecology - 2021 -
Ecological load and balancing selection in circumboreal
barnacles.
Joaquin C B Nunez, Stephen Rong, Alejandro Damian-Serrano, John T Burley, Rebecca G Elyanow, David A Ferranti, Kimberly B Neil, Henrik Glenner, Magnus Alm Rosenblad, Anders Blomberg, Kerstin Johannesson, David M Rand
Molecular biology and evolution - 2021 -
Footprints of natural selection at the mannose-6-phosphate isomerase locus in
barnacles
J. C. B. Nunez, P. A. Flight, K. B. Neil, S. Rong, Leif A Eriksson, D. A. Ferranti, Magnus Alm Rosenblad, Anders Blomberg, D. M. Rand
Proceedings of the National Academy of Sciences of the United States of America - 2020 -
The round goby genome provides insights into mechanisms that may facilitate biological
invasions
I. Adrian-Kalchhauser, Anders Blomberg, Tomas Larsson, Z. Musilova, C. R. Peart, M. Pippel, M. H. Solbakken, J. Suurvali, J. C. Walser, J. Y. Wilson, Magnus Alm Rosenblad, D. Burguera, S. Gutnik, N. Michiels, Mats H. Töpel, K. Pankov, S. Schloissnig, S. Winkler
BMC Biology - 2020 -
Sensory receptor repertoire in cyprid antennules of the barnacle Balanus
improvisus
Anna Abramova, Magnus Alm Rosenblad, Anders Blomberg, T.A. Larsson
PLoS ONE - 2019 -
The complex barnacle perfume: identification of waterborne pheromone homologues in Balanus improvisus and their differential expression during
settlement
Anna Abramova, Ulrika Lind, Anders Blomberg, Magnus Alm Rosenblad
Biofouling - 2019 -
Analysis of aquaporins from the euryhaline barnacle Balanus improvisus reveals differential expression in response to changes in
salinity
Ulrika Lind, Michael Järvå, Magnus Alm Rosenblad, Piero Pingitore, Emil Karlsson, Anna Lisa Wrange, Emelie Kamdal, Kristina Sundell, Carl André, Per R. Jonsson, Jonathan N. Havenhand, Leif A Eriksson, Kristina Hedfalk, Anders Blomberg
PLoS ONE - 2017 -
The mitochondrial genome sequences of the round goby and the sand goby reveal patterns of recent evolution in gobiid
fish
Irene Adrian-Kalchhauser, Ola Svensson, Verena E. Kutschera, Magnus Alm Rosenblad, Martin Pippel, Sylke Winkler, Siegfried Schloissnig, Anders Blomberg, Patricia Burkhardt-Holm
BMC Genomics - 2017 -
Detection of signal recognition particle (SRP) RNAs in the nuclear ribosomal internal transcribed spacer 1 (ITS1) of three lineages of ectomycorrhizal fungi (Agaricomycetes,
Basidiomycota)
Magnus Alm Rosenblad, María P. Martín, Leho Tedersoo, Martin K. Ryberg, Ellen Larsson, Christian Wurzbacher, Kessy Abarenkov, R. Henrik Nilsson
MycoKeys - 2016 -
The Story of a Hitchhiker: Population Genetic Patterns in the Invasive Barnacle Balanus (Amphibalanus) improvisus Darwin
1854
Anna-Lisa Wrange, Grégory Charrier, A. Thonig, Magnus Alm Rosenblad, Anders Blomberg, Jonathan N. Havenhand, Per R. Jonsson, Carl André
Plos One - 2016 -
Metagenomic Sequencing of Marine Periphyton: Taxonomic and Functional Insights into Biofilm
Communities
Kemal Sanli, Johan Bengtsson-Palme, R. Henrik Nilsson, Erik Kristiansson, Magnus Alm Rosenblad, Hans Blanck, Karl Martin Eriksson
Frontiers in Microbiology - 2015 -
Noncanoncial signal recognition particle RNAs in a major eukaryotic phylum revealed by purification of SRP from the human pathogen Cryptococcus
neoformans.
Phillip A Dumesic, Magnus Alm Rosenblad, Tore Samuelsson, Tiffany Nguyen, James J Moresco, John R Yates, Hiten D Madhani
Nucleic acids research - 2015 -
The Skeletonema marinoi genome
project
Mats H. Töpel, Sylvie V M Tesson, Magnus Alm Rosenblad, Tomas Larsson, Alvar Almstedt, Susanna Gross, Kerstin Johannesson, Anders Blomberg, Anna Godhe
EMBO: Molecular life of Diatoms. 7-10 July, Seattle, USA - 2015 -
Species and gene divergence in Littorina snails detected by array comparative genomic
hybridization
Marina Panova, T. Johansson, B. Canbäck, J. Bentzer, Magnus Alm Rosenblad, Kerstin Johannesson, A. Tunlid, Carl André
BMC Genomics - 2014 -
Do the same genes underlie parallel phenotypic divergence in different Littorina saxatilis
populations?
A. M. Westram, J. Galindo, Magnus Alm Rosenblad, J. W. Grahame, Marina Panova, Roger Butlin
Molecular Ecology - 2014 -
Metagenomics reveals that detoxification systems are underrepresented in marine bacterial
communities
Johan Bengtsson-Palme, Magnus Alm Rosenblad, Mikael Molin, Anders Blomberg
BMC Genomics - 2014 -
Structural diversity of signal recognition particle RNAs in
plastids
Magnus Alm Rosenblad, Chantal Träger, Danja Schünemann
Plant Signalling & Behavior - 2013 -
Molecular Characterization of the alpha-Subunit of Na+/K+ ATPase from the Euryhaline Barnacle Balanus improvisus Reveals Multiple Genes and Differential Expression of Alternative Splice
Variants
Ulrika Lind, Magnus Alm Rosenblad, Anna-Lisa Wrange, Kristina Sundell, Per R. Jonsson, Carl André, Jonathan N. Havenhand, Anders Blomberg
Plos One - 2013 -
Signal Recognition Particle RNA in Dinoflagellates and the Perkinsid Perkinsus
marinus
H. Zhang, D. A. Campbell, N. R. Sturm, Magnus Alm Rosenblad, C. F. Dungan, S. J. Lin
Protist - 2013 -
Evolution from the Prokaryotic to the Higher Plant Chloroplast Signal Recognition Particle: The Signal Recognition Particle RNA Is Conserved in Plastids of a Wide Range of Photosynthetic
Organisms
Chantal Träger, Magnus Alm Rosenblad, Dominik Ziehe, Christel Garcia, Lukas Schrader, Klaus Kock, Christine Vera Richter, Birgit Klinkert, Franz Narberhaus, Christian Herrmann, Eckhard Hofmann, Henrik Aronsson, Danja Schünemann
The Plant Cell - 2012 -
Starting to unravel the layer of life on surfaces in the sea: Metagenomics of complex marine biofilm
communities
Karl Martin Eriksson, Kemal Sanli, Johan Bengtsson, R. Henrik Nilsson, Magnus Alm Rosenblad, Hans Blanck
ISME14 Conference, Copenhagen, Denmark, 2012-08-20 - 2012 -
Metaxa: a software tool for automated detection and discrimination among ribosomal small subunit (12S/16S/18S) sequences of archaea, bacteria, eukaryotes, mitochondria, and chloroplasts in metagenomes and environmental sequencing
datasets
Johan Bengtsson-Palme, Martin Eriksson, Martin Hartmann, Wang Zheng, Belle Damodara Shenoy, Gwen-Aëlle Grelet, Kessy Abarenkov, Anna Petri, Magnus Alm Rosenblad, R. Henrik Nilsson
Antonie van Leeuwenhoek. International Journal of General and Molecular Microbiology - 2011 -
Metaxa: a software tool for automated detection and discrimination among ribosomal small subunit (12S/16S/18S) sequences of archaea, bacteria, eukaryotes, mitochondria, and chloroplasts in metagenomes and environmental sequencing
datasets
Johan Bengtsson-Palme, Karl Martin Eriksson, Martin Hartmann, Wang Zheng, Belle Damodara Shenoy, Gwen-Aëlle Grelet, Kessy Abarenkov, Anna Petri, Magnus Alm Rosenblad, R. Henrik Nilsson
Antonie van Leeuwenhoek: international journal of general and molecular microbiology - 2011 -
Metaxa: Automated detection and discrimination among ribosomal small subunit (12S/16S/18S) sequences of archaea, bacteria, eukaryotes, mitochondria, and
chloroplasts
Johan Bengtsson, Karl Martin Eriksson, Martin Hartmann, Zheng Wang, Belle D Shenoy, G Grelet, Kessy Abarenkov, Anna Petri, Magnus Alm Rosenblad, R. Henrik Nilsson
SocBiN Bioinformatics Conference, Helsinki, Finland, 2011 - 2011 -
Evolutionary loss of 8-oxo-G repair components among
eukaryotes
Kristina Jansson, Anders Blomberg, Per Sunnerhagen, Magnus Alm Rosenblad
Genome Integrity - 2010 -
Octopamine receptors from the barnacle balanus improvisus are activated by the alpha2-adrenoceptor agonist
medetomidine.
Ulrika Lind, Magnus Alm Rosenblad, Linda Hasselberg Frank, Susanna Falkbring, Lars Brive, Jonne M Laurila, Katariina Pohjanoksa, Anne Vuorenpää, Jyrki P Kukkonen, Lina-Maria Gunnarsson, Mika Scheinin, Lena Mårtensson Lindblad, Anders Blomberg
Molecular pharmacology - 2010 -
Conserved and variable domains of RNase MRP
RNA
Marcela Davila Lopez, Magnus Alm Rosenblad, Tore Samuelsson
RNA Biology - 2009 -
Kinship in the SRP RNA
family
Magnus Alm Rosenblad, Niels Larsen, Tore Samuelsson, Christian Zwieb
RNA Biology - 2009 -
Establishing the barnacle Balanus improvisus as a potent invertebrate monitoring system in marine
ecotoxicogenomics
Anders Blomberg, Susanna Falkbring, Magnus Alm Rosenblad, Noomi Asker, Erik Kristiansson, Linda Hasselberg, Ellinor Pettersson, Ulrika Lind, Jörgen Östling, Lars Förlin, D. G. Joakim Larsson
SETAC Europe 19th Annual Meeting Abstract Book, Göteborg 31 May - 4 June, 2009 - 2009 -
Computational screen for spliceosomal RNA genes aids in defining the phylogenetic distribution of major and minor spliceosomal
components
Marcela Davila Lopez, Magnus Alm Rosenblad, Tore Samuelsson
Nucleic Acids Research - 2008 -
Computational screen for spliceosomal RNA genes aids in defining the phylogenetic distribution of the major and minor spliceosomal
components
Marcela Davila Lopez, Magnus Alm Rosenblad, Tore Samuelsson
RNA Society Meeting 2008 - 2008 -
The Signal Recognition Particle of the diplomonad Giardia lacks the Alu domain responsible for translational
arrest
Magnus Alm Rosenblad, Lotta Avesson, Staffan Svärd, Fredrik Söderbom
RNA Society Meeting 2008 - 2008 -
Inventory and analysis of the protein subunits of the ribonucleases P and MRP provides further evidence of homology between the yeast and human
enzymes.
Magnus Alm Rosenblad, Marcela Davila Lopez, Paul Piccinelli, Tore Samuelsson
Nucleic acids research - 2006 -
The tmRDB and SRPDB
resources.
Ebbe Sloth Andersen, Magnus Alm Rosenblad, Niels Larsen, Jesper Cairo Westergaard, Jody Burks, Iwona K Wower, Jacek Wower, Jan Gorodkin, Tore Samuelsson, Christian Zwieb
Nucleic acids research - 2006 -
A nomenclature for all signal recognition particle
RNAs.
Christian Zwieb, Rob W van Nues, Magnus Alm Rosenblad, Jeremy D Brown, Tore Samuelsson
RNA (New York, N.Y.) - 2005 -
Identification and analysis of ribonuclease P and MRP RNA in a broad range of
eukaryotes.
Paul Piccinelli, Magnus Alm Rosenblad, Tore Samuelsson
Nucleic acids research - 2005 -
Computational identification of RNA and protein components from the Signal Recognition
Particle
Magnus Alm Rosenblad
2005 -
Identification of chloroplast signal recognition particle RNA
genes.
Magnus Alm Rosenblad, Tore Samuelsson
Plant & cell physiology - 2004 -
Identification and comparative analysis of components from the signal recognition particle in protozoa and
fungi.
Magnus Alm Rosenblad, Christian Zwieb, Tore Samuelsson
BMC genomics - 2004 -
SRPDB: Signal Recognition Particle
Database
Magnus Alm Rosenblad, Jan Gorodkin, Bjarne Knudsen, Christian Zwieb, Tore Samuelsson
Nucleic Acids Research - 2003 -
Prediction of signal recognition particle RNA
genes
Marco Regalia, Magnus Alm Rosenblad, Tore Samuelsson
Nucleic Acids Research - 2002